Mouse (GRCm39)
Description

ALX homeobox 1 [Source:MGI Symbol;Acc:MGI:104621]

Gene Synonyms

Cart1

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 1583 variant alleles and maps to 152 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000217946.2Alx1-2041542377aaENSMUSP00000152017.2
 
Protein coding
A0A1W2P8B9 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000167156.9Alx1-2032689326aaENSMUSP00000129230.2
 
Protein coding
CCDS24155Q8C8B0 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000040859.6Alx1-2012493326aaENSMUSP00000042512.6
 
Protein coding
CCDS24155Q8C8B0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000218282.2Alx1-2052012326aaENSMUSP00000151776.2
 
Protein coding
CCDS24155Q8C8B0 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000219194.2Alx1-2081695326aaENSMUSP00000152018.2
 
Protein coding
CCDS24155Q8C8B0 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000218681.2Alx1-2071702255aaENSMUSP00000151728.2
 
Nonsense mediated decay
A0A1W2P7M4 TSL:5
ENSMUST00000164226.3Alx1-2021613No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000218508.2Alx1-2062284No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 8, Coding exons: 4, Transcript length: 2,012 bps, Translation length: 326 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C8B0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24155

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000218282.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.