Mouse (GRCm39)
Description

TATA-box binding protein associated factor, RNA polymerase I, D [Source:MGI Symbol;Acc:MGI:1922566]

Gene Synonyms

4930553M18Rik, Josd3, TAF(I)41, TAFI41

Location
About this transcript

This transcript has 11 exons, is associated with 953 variant alleles and maps to 198 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000034415.6Taf1d-2011148322aaENSMUSP00000034415.6
 
Protein coding
CCDS22836Q9D4V4 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000164079.9Taf1d-2021005290aaENSMUSP00000129141.2
 
Protein coding
CCDS52726Q9D4V4-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000215124.2Taf1d-211629153aaENSMUSP00000150723.2
 
Protein coding
A0A1L1SUD1 TSL:3CDS 3' incomplete
ENSMUST00000216109.2Taf1d-21361292aaENSMUSP00000150890.2
 
Protein coding
A0A1L1SUU1 TSL:5CDS 3' incomplete
ENSMUST00000214316.2Taf1d-20935323aaENSMUSP00000149380.2
 
Protein coding
A0A1L1SRB1 TSL:5CDS 5' incomplete
ENSMUST00000214054.2Taf1d-2073126288aaENSMUSP00000150937.2
 
Nonsense mediated decay
Q9D4V4-3 TSL:5
ENSMUST00000213763.2Taf1d-2041216288aaENSMUSP00000150356.2
 
Nonsense mediated decay
Q9D4V4-3 TSL:1
ENSMUST00000216825.2Taf1d-2161210288aaENSMUSP00000149377.2
 
Nonsense mediated decay
Q9D4V4-3 TSL:1
ENSMUST00000215749.2Taf1d-212651122aaENSMUSP00000150491.2
 
Nonsense mediated decay
A0A1L1STW1 TSL:3CDS 5' incomplete
ENSMUST00000214045.2Taf1d-206491No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000213235.2Taf1d-2034881No protein-
 
Retained intron
-TSL:2
ENSMUST00000214221.2Taf1d-2082818No protein-
 
Retained intron
-TSL:1
ENSMUST00000213923.2Taf1d-2052339No protein-
 
Retained intron
-TSL:2
ENSMUST00000214899.2Taf1d-2101717No protein-
 
Retained intron
-TSL:NA
ENSMUST00000216256.2Taf1d-2141702No protein-
 
Retained intron
-TSL:NA
ENSMUST00000216768.2Taf1d-215502No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 11, Coding exons: 0, Transcript length: 2,339 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000213923.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.