Transcript: ENSMUST00000213215.2 Gsta4-202

Description

glutathione S-transferase, alpha 4 [Source:MGI Symbol;Acc:MGI:1309515]

Gene Synonyms

GST 5.7, mGsta4

Location

Chromosome 9: 78,090,056-78,113,237 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 1917 variant alleles and maps to 74 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000032348.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000034903.7	Gsta4-201	977	222aa	ENSMUSP00000034903.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23357	P24472	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000213215.2	Gsta4-202	743	105aa	ENSMUSP00000149763.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SS61	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 743 bps, Translation length: 105 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000213215.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000213215.2 Gsta4-202

Summary

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Transcript: ENSMUST00000213215.2 Gsta4-202

Summary

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