Mouse (GRCm39)
Description

collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]

Gene Synonyms

C530001D20Rik

About this transcript

This transcript has 12 exons, is annotated with 1 domain and feature, is associated with 1607 variant alleles and maps to 72 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000092155.12Col11a1-20176671804aaENSMUSP00000089793.6
 
Protein coding
CCDS17778Q61245 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000123619.8Col11a1-2022064567aaENSMUSP00000121027.2
 
Protein coding
E9PVT8 TSL:5CDS 3' incomplete
ENSMUST00000184978.2Col11a1-2042570536aaENSMUSP00000138879.2
 
Nonsense mediated decay
V9GWX8 TSL:1CDS 5' incomplete
ENSMUST00000211802.2Col11a1-207675128aaENSMUSP00000148798.2
 
Nonsense mediated decay
A0A1D5RMJ0 TSL:3CDS 5' incomplete
ENSMUST00000196345.2Col11a1-2052519No protein-
 
Retained intron
-TSL:NA
ENSMUST00000138680.2Col11a1-2032112No protein-
 
Retained intron
-TSL:1
ENSMUST00000196654.2Col11a1-206969No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 12, Coding exons: 8, Transcript length: 675 bps, Translation length: 128 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000211802.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.