Transcript: ENSMUST00000211558.2 Prkaca-202

Description

protein kinase, cAMP dependent, catalytic, alpha [Source:MGI Symbol;Acc:MGI:97592]

Gene Synonyms

C alpha, Cs, PKA, Pkaca

Location

Chromosome 8: 84,703,512-84,722,223 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 1269 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000005469.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000005606.8	Prkaca-201	2276	351aa	ENSMUSP00000005606.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22463	P05132	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000211558.2	Prkaca-202	1399	343aa	ENSMUSP00000147256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS85574	P05132-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,399 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05132

CCDS

This transcript is a member of the Mouse CCDS set: CCDS85574

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000211558.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000211558.2 Prkaca-202

Summary

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Transcript: ENSMUST00000211558.2 Prkaca-202

Summary

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