Transcript: ENSMUST00000210365.2 Tmem59l-202

Description

transmembrane protein 59-like [Source:MGI Symbol;Acc:MGI:1915187]

Gene Synonyms

5330410G16Rik

Location

Chromosome 8: 70,937,821-70,939,974 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 428 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000035964.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000045286.9	Tmem59l-201	1491	337aa	ENSMUSP00000043659.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22368	Q7TNI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000210365.2	Tmem59l-202	737	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 737 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000210365.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000210365.2 Tmem59l-202

Summary

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Transcript: ENSMUST00000210365.2 Tmem59l-202

Summary

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