Transcript: ENSMUST00000209809.2 Art1-202

Description

ADP-ribosyltransferase 1 [Source:MGI Symbol;Acc:MGI:107511]

Gene Synonyms

ADPRT, Yac-1

Location

Chromosome 7: 101,750,950-101,763,140 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 1238 variant alleles and maps to 332 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000030996.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000033300.4	Art1-201	1425	325aa	ENSMUSP00000033300.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21526	Q545U9 Q60935	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000209809.2	Art1-202	2341	325aa	ENSMUSP00000147911.2	Nonsense mediated decay	CCDS21526	Q545U9 Q60935	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000210211.2	Art1-203	1227	101aa	ENSMUSP00000148204.2	Nonsense mediated decay		Q9D7F1	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 2,341 bps, Translation length: 325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q60935

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21526

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000209809.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000209809.2 Art1-202

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Transcript: ENSMUST00000209809.2 Art1-202

Summary

About Us

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