Mouse (GRCm39)
Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F [Source:MGI Symbol;Acc:MGI:1096347]

Gene Synonyms

Sema IV, Semak

About this transcript

This transcript has 4 exons, is associated with 500 variant alleles and maps to 55 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000192727.6Sema3f-2042383785aaENSMUSP00000141865.2
 
Protein coding
CCDS81069O88632 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000080560.9Sema3f-2013395754aaENSMUSP00000079400.4
 
Protein coding
CCDS23505O88632-2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000192783.6Sema3f-205906284aaENSMUSP00000141668.2
 
Protein coding
A0A0A6YWS0 TSL:3CDS 5' incomplete
ENSMUST00000193108.6Sema3f-206685191aaENSMUSP00000141878.2
 
Protein coding
A0A0A6YX80 TSL:5CDS 3' incomplete
ENSMUST00000195023.3Sema3f-211443148aaENSMUSP00000141350.2
 
Protein coding
A0A0A6YW11 TSL:3CDS 5' and 3' incomplete
ENSMUST00000194039.6Sema3f-2082972185aaENSMUSP00000142221.2
 
Nonsense mediated decay
A0A0A6YY06 TSL:1
ENSMUST00000194424.6Sema3f-209711116aaENSMUSP00000142178.2
 
Nonsense mediated decay
A0A0A6YXX2 TSL:3CDS 5' incomplete
ENSMUST00000193665.6Sema3f-2071034No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000195267.6Sema3f-2121084No protein-
 
Retained intron
-TSL:3
ENSMUST00000194846.2Sema3f-210695No protein-
 
Retained intron
-TSL:3
ENSMUST00000192712.2Sema3f-203581No protein-
 
Retained intron
-TSL:3
ENSMUST00000192157.2Sema3f-202376No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 4, Coding exons: 0, Transcript length: 581 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000192712.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.