Transcript: ENSMUST00000190013.7 Uba1y-202

Description

ubiquitin-activating enzyme, Chr Y [Source:MGI Symbol;Acc:MGI:98891]

Gene Synonyms

A1s9Y-1, Sby, Ube-2, Ube1y-1, Ube1y1

Location

Chromosome Y: 818,649-843,684 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 30 domains and features, is associated with 592 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000069053.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000115894.3	Uba1y-201	3981	1058aa	ENSMUSP00000111560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30540	P31254	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000190013.7	Uba1y-202	3441	1058aa	ENSMUSP00000140543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30540	P31254	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,441 bps, Translation length: 1,058 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P31254

CCDS

This transcript is a member of the Mouse CCDS set: CCDS30540

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000190013.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000190013.7 Uba1y-202

Summary

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Transcript: ENSMUST00000190013.7 Uba1y-202

Summary

About Us

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