Transcript: ENSMUST00000187823.2 Krtap15-202

Description

keratin associated protein 15 [Source:MGI Symbol;Acc:MGI:1347350]

Gene Synonyms

Pmg-2

Location

Chromosome 16: 88,625,882-88,626,732 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 4 domains and features, is associated with 528 variant alleles and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022931.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000187823.2	Krtap15-202	851	150aa	ENSMUSP00000140888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS79477	Q9QZU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000023648.6	Krtap15-201	381	127aa	ENSMUSP00000023648.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6Z3P4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 851 bps, Translation length: 150 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QZU5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS79477

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000187823.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000187823.2 Krtap15-202

Summary

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Transcript: ENSMUST00000187823.2 Krtap15-202

Summary

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