Transcript: ENSMUST00000185822.8 1700086L19Rik-202

Description

RIKEN cDNA 1700086L19 gene [Source:NCBI gene (formerly Entrezgene);Acc:74284]

Gene Synonyms

1700006L05Rik

Location

About this transcript

This transcript has 5 exons, is associated with 949 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000186463.8	1700086L19Rik-203	1291	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000185822.8	1700086L19Rik-202	1110	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000244064.1	1700086L19Rik-207	908	No protein	-	lncRNA	-
ENSMUST00000241154.1	1700086L19Rik-204	807	No protein	-	lncRNA	-
ENSMUST00000242913.1	1700086L19Rik-205	798	No protein	-	lncRNA	-
ENSMUST00000243121.1	1700086L19Rik-206	683	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,110 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000185822.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.