Transcript: ENSMUST00000183888.3 Rhox2g-202

Description

reproductive homeobox 2G [Source:MGI Symbol;Acc:MGI:3648776]

Gene Synonyms

EG434766, Rhox2.7

Location

Chromosome X: 36,820,768-36,824,699 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 1156 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000079629.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000115169.4	Rhox2g-201	795	191aa	ENSMUSP00000110823.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53059	L7MUB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000183888.3	Rhox2g-202	489	91aa	ENSMUSP00000139146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		V9GXH1	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 489 bps, Translation length: 91 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000183888.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000183888.3 Rhox2g-202

Summary

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Transcript: ENSMUST00000183888.3 Rhox2g-202

Summary

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