Transcript: ENSMUST00000182172.2 Ccdc166-201

Description

coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]

Gene Synonyms

2410075B13Rik

Location

Chromosome 15: 75,851,721-75,854,304 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 8 domains and features, is associated with 650 variant alleles and maps to 256 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000098176.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000183130.3	Ccdc166-202	2458	449aa	ENSMUSP00000138115.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59621	S4R181	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000182172.2	Ccdc166-201	2584	211aa	ENSMUSP00000138510.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59620	Q0P5Z5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,584 bps, Translation length: 211 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS59620

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000182172.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000182172.2 Ccdc166-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000182172.2 Ccdc166-201

Summary

About Us

Get help

Our sister sites

Follow us