Transcript: ENSMUST00000180974.3 C920006O11Rik-202

Description

RIKEN cDNA C920006O11 gene [Source:NCBI gene (formerly Entrezgene);Acc:320295]

Location

About this transcript

This transcript has 4 exons, is associated with 798 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000244552.1	C920006O11Rik-206	2539	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000243712.1	C920006O11Rik-204	2465	No protein	-	lncRNA	-
ENSMUST00000243960.1	C920006O11Rik-205	2267	No protein	-	lncRNA	-
ENSMUST00000180974.3	C920006O11Rik-202	1457	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241112.1	C920006O11Rik-203	537	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,457 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000180974.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.