Mouse (GRCm39)
Description

treacle ribosome biogenesis factor 1 [Source:MGI Symbol;Acc:MGI:892003]

Gene Synonyms

treacle

Location
About this transcript

This transcript has 25 exons, is annotated with 56 domains and features, is associated with 2718 variant alleles and maps to 377 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000175934.8Tcof1-20245951356aaENSMUSP00000135639.2
 
Protein coding
CCDS57125H3BL37 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:2
ENSMUST00000176630.8Tcof1-20445291320aaENSMUSP00000135476.2
 
Protein coding
CCDS37836O08784 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000177172.8Tcof1-20532291056aaENSMUSP00000134755.2
 
Protein coding
H3BIX0 TSL:5CDS 3' incomplete
ENSMUST00000177343.2Tcof1-206582167aaENSMUSP00000135295.2
 
Protein coding
H3BK88 TSL:3CDS 3' incomplete
ENSMUST00000163446.9Tcof1-20140641013aaENSMUSP00000130454.3
 
Nonsense mediated decay
F6R3V4 TSL:5
ENSMUST00000176088.2Tcof1-203865No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 25, Coding exons: 24, Transcript length: 4,529 bps, Translation length: 1,320 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08784

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37836

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000176630.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.