Mouse (GRCm39)
Description

cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568]

Gene Synonyms

CDP, Cutl1, Cux, Cux-1

About this transcript

This transcript has 20 exons, is annotated with 59 domains and features, is associated with 4049 variant alleles and maps to 282 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000176172.8Cux1-20648821517aaENSMUSP00000135086.2
 
Protein coding
H3BJQ9 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000004097.16Cux1-201128621426aaENSMUSP00000004097.9
 
Protein coding
CCDS39328E9QKE9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000175975.9Cux1-204109451504aaENSMUSP00000135223.3
 
Protein coding
CCDS71684H3BK24 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000176778.8Cux1-21255201509aaENSMUSP00000135892.2
 
Protein coding
H3BLS0 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000176486.9Cux1-20948901389aaENSMUSP00000135370.3
 
Protein coding
H3BKF6 TSL:1CDS 5' incomplete
ENSMUST00000176745.8Cux1-2112831676aaENSMUSP00000135512.2
 
Protein coding
CCDS57391H3BKT0 GENCODE basicTSL:1
ENSMUST00000176216.9Cux1-2072821678aaENSMUSP00000135054.2
 
Protein coding
CCDS71685H3BJN3 GENCODE basicTSL:1
ENSMUST00000175998.8Cux1-2052195472aaENSMUSP00000135816.3
 
Protein coding
H3BLJ7 TSL:5CDS 5' incomplete
ENSMUST00000176423.2Cux1-208805268aaENSMUSP00000135036.3
 
Protein coding
H3BJL7 TSL:3CDS 5' and 3' incomplete
ENSMUST00000175918.9Cux1-2032565199aaENSMUSP00000135606.3
 
Nonsense mediated decay
H3BL09 TSL:5
ENSMUST00000177297.8Cux1-2131926543aaENSMUSP00000134819.2
 
Nonsense mediated decay
H3BJ26 TSL:5
ENSMUST00000163906.2Cux1-2021885No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000177305.2Cux1-2143290No protein-
 
Retained intron
-TSL:2
ENSMUST00000176501.2Cux1-2101616No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,890 bps, Translation length: 1,389 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000176486.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.