Mouse (GRCm39)
Description

histocompatibility 2, T region locus 3 [Source:MGI Symbol;Acc:MGI:95959]

Gene Synonyms

H-2T3, H2-Tw3, TL

Location
About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 2328 variant alleles and maps to 170 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000102675.10H2-T3-2042312384aaENSMUSP00000099736.4
 
Protein coding
CCDS28718Q05A75 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000025312.13H2-T3-2012114340aaENSMUSP00000025312.7
 
Protein coding
F6TIX5 GENCODE basicTSL:1
ENSMUST00000097329.10H2-T3-20320568aaENSMUSP00000138177.2
 
Protein coding
S4R1D6 TSL:1CDS 3' incomplete
ENSMUST00000173133.8H2-T3-2061896384aaENSMUSP00000134469.2
 
Nonsense mediated decay
CCDS28718Q05A75 TSL:5
ENSMUST00000172663.8H2-T3-2051217220aaENSMUSP00000134547.2
 
Nonsense mediated decay
G3UZL7 TSL:1
ENSMUST00000173629.8H2-T3-2091200119aaENSMUSP00000134607.2
 
Nonsense mediated decay
G3UZR8 TSL:1
ENSMUST00000095300.3H2-T3-20267443aaENSMUSP00000138582.2
 
Nonsense mediated decay
S4R2B8 TSL:1
ENSMUST00000174101.8H2-T3-21065938aaENSMUSP00000138563.2
 
Nonsense mediated decay
S4R2A2 TSL:1
ENSMUST00000173577.8H2-T3-2082268No protein-
 
Retained intron
-TSL:1
ENSMUST00000173435.8H2-T3-2071323No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,896 bps, Translation length: 384 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28718

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000173133.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.