RIKEN cDNA 1110038B12 gene [Source:MGI Symbol;Acc:MGI:1916013]
Chromosome 17: 35,169,206-35,171,474 reverse strand.
This transcript has 4 exons, is associated with 697 variant alleles and maps to 118 oligo probes.
This transcript is a product of gene ENSMUSG00000092203.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| ENSMUST00000174464.3 | 1110038B12Rik-207 | 2017 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, | |
| ENSMUST00000174173.3 | 1110038B12Rik-206 | 1848 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENSMUST00000172531.3 | 1110038B12Rik-202 | 1837 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, | |
| ENSMUST00000174039.9 | 1110038B12Rik-205 | 1033 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, | |
| ENSMUST00000173811.9 | 1110038B12Rik-204 | 774 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, | |
| ENSMUST00000241056.1 | 1110038B12Rik-210 | 2241 | No protein | - | lncRNA | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| ENSMUST00000242750.1 | 1110038B12Rik-221 | 2061 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000247482.1 | 1110038B12Rik-237 | 2024 | No protein | - | lncRNA | - | |
| ENSMUST00000247447.1 | 1110038B12Rik-235 | 1808 | No protein | - | lncRNA | - | |
| ENSMUST00000247300.1 | 1110038B12Rik-234 | 1799 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000247460.1 | 1110038B12Rik-236 | 1639 | No protein | - | lncRNA | - | |
| ENSMUST00000241911.1 | 1110038B12Rik-216 | 1628 | No protein | - | lncRNA | - | |
| ENSMUST00000242812.1 | 1110038B12Rik-222 | 1199 | No protein | - | lncRNA | - | |
| ENSMUST00000246439.1 | 1110038B12Rik-231 | 1019 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000246393.1 | 1110038B12Rik-229 | 984 | No protein | - | lncRNA | - | |
| ENSMUST00000246312.1 | 1110038B12Rik-228 | 834 | No protein | - | lncRNA | - | |
| ENSMUST00000246468.1 | 1110038B12Rik-232 | 831 | No protein | - | lncRNA | - | |
| ENSMUST00000242557.1 | 1110038B12Rik-220 | 812 | No protein | - | lncRNA | - | |
| ENSMUST00000243070.1 | 1110038B12Rik-223 | 805 | No protein | - | lncRNA | - | |
| ENSMUST00000246606.1 | 1110038B12Rik-233 | 780 | No protein | - | lncRNA | - | |
| ENSMUST00000245494.1 | 1110038B12Rik-227 | 762 | No protein | - | lncRNA | - | |
| ENSMUST00000242472.1 | 1110038B12Rik-219 | 724 | No protein | - | lncRNA | - | |
| ENSMUST00000241531.1 | 1110038B12Rik-213 | 648 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000172501.9 | 1110038B12Rik-201 | 647 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENSMUST00000241683.1 | 1110038B12Rik-215 | 641 | No protein | - | lncRNA | - | |
| ENSMUST00000245242.1 | 1110038B12Rik-226 | 616 | No protein | - | lncRNA | - | |
| ENSMUST00000243203.1 | 1110038B12Rik-224 | 563 | No protein | - | lncRNA | - | |
| ENSMUST00000174714.9 | 1110038B12Rik-208 | 554 | No protein | - | lncRNA | TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, | |
| ENSMUST00000241432.1 | 1110038B12Rik-212 | 553 | No protein | - | lncRNA | - | |
| ENSMUST00000240974.1 | 1110038B12Rik-209 | 504 | No protein | - | lncRNA | - | |
| ENSMUST00000242404.1 | 1110038B12Rik-218 | 503 | No protein | - | lncRNA | - | |
| ENSMUST00000173070.9 | 1110038B12Rik-203 | 472 | No protein | - | lncRNA | TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENSMUST00000241591.1 | 1110038B12Rik-214 | 465 | No protein | - | lncRNA | - | |
| ENSMUST00000243406.1 | 1110038B12Rik-225 | 463 | No protein | - | lncRNA | - | |
| ENSMUST00000242276.1 | 1110038B12Rik-217 | 404 | No protein | - | lncRNA | - | |
| ENSMUST00000246400.1 | 1110038B12Rik-230 | 402 | No protein | - | lncRNA | - | |
| ENSMUST00000241231.1 | 1110038B12Rik-211 | 352 | No protein | - | lncRNA | - |