Mouse (GRCm39)
Description

polypyrimidine tract binding protein 1 [Source:MGI Symbol;Acc:MGI:97791]

Gene Synonyms

Ptb, hnRNP I

Location
About this transcript

This transcript has 14 exons, is annotated with 30 domains and features, is associated with 893 variant alleles and maps to 279 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000172282.8Ptbp1-2163110555aaENSMUSP00000126192.2
 
Protein coding
CCDS35969P17225-1 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000165704.8Ptbp1-2063169529aaENSMUSP00000127783.2
 
Protein coding
CCDS35970P17225-2 GENCODE basicTSL:1
ENSMUST00000095457.11Ptbp1-2022598489aaENSMUSP00000093109.5
 
Protein coding
CCDS70064Q8CB58 GENCODE basicTSL:1
ENSMUST00000171599.8Ptbp1-215389113aaENSMUSP00000131296.2
 
Protein coding
E9PZ39 TSL:2CDS 3' incomplete
ENSMUST00000168683.2Ptbp1-20937555aaENSMUSP00000132383.2
 
Protein coding
E9Q0W3 TSL:2CDS 3' incomplete
ENSMUST00000169091.2Ptbp1-211319107aaENSMUSP00000128449.2
 
Protein coding
F7DCW4 TSL:5CDS 5' and 3' incomplete
ENSMUST00000057343.16Ptbp1-2011765353aaENSMUSP00000059481.10
 
Nonsense mediated decay
E9QMW9 TSL:5
ENSMUST00000165724.8Ptbp1-207848162aaENSMUSP00000130749.2
 
Nonsense mediated decay
F7AXP1 TSL:5CDS 5' incomplete
ENSMUST00000169483.8Ptbp1-21238562aaENSMUSP00000127507.2
 
Nonsense mediated decay
E9Q279 TSL:3
ENSMUST00000099958.9Ptbp1-203657No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000168216.8Ptbp1-208369No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000165153.8Ptbp1-2052369No protein-
 
Retained intron
-TSL:5
ENSMUST00000169580.2Ptbp1-2132108No protein-
 
Retained intron
-TSL:2
ENSMUST00000168988.8Ptbp1-210950No protein-
 
Retained intron
-TSL:3
ENSMUST00000171216.2Ptbp1-214744No protein-
 
Retained intron
-TSL:2
ENSMUST00000164385.8Ptbp1-204693No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,110 bps, Translation length: 555 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17225

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35969

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000172282.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.