Transcript: ENSMUST00000170323.3 Septin12-201

Description

septin 12 [Source:MGI Symbol;Acc:MGI:1918339]

Gene Synonyms

1700028G04Rik, 4933413B09Rik, Sept12, Septin12

Location

Chromosome 16: 4,804,722-4,815,716 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 1082 variant alleles and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022542.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000230362.2	Septin12-203	1295	357aa	ENSMUSP00000154901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VJU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000170323.3	Septin12-201	2576	317aa	ENSMUSP00000131062.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27929	Q9D451	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229321.2	Septin12-202	1227	278aa	ENSMUSP00000155459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9D9U8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230878.2	Septin12-204	1239	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,576 bps, Translation length: 317 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27929

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000170323.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000170323.3 Septin12-201

Summary

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Transcript: ENSMUST00000170323.3 Septin12-201

Summary

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