Transcript: ENSMUST00000169559.3 Vmn2r110-201

Description

vomeronasal 2, receptor 110 [Source:MGI Symbol;Acc:MGI:3644602]

Gene Synonyms

EG224582

Location

Chromosome 17: 20,788,022-20,816,685 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 42 domains and features, is associated with 1743 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000091259.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000169559.3	Vmn2r110-201	8810	858aa	ENSMUSP00000129347.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49988	E9PWD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233022.2	Vmn2r110-203	8747	837aa	ENSMUSP00000156560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WCK1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000232904.2	Vmn2r110-202	9104	78aa	ENSMUSP00000156608.2	Nonsense mediated decay		A0A3B2W3V0	-
ENSMUST00000233630.2	Vmn2r110-204	9041	78aa	ENSMUSP00000156414.2	Nonsense mediated decay		A0A3B2W3V0	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 8,810 bps, Translation length: 858 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49988

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000169559.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000169559.3 Vmn2r110-201

Summary

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Transcript: ENSMUST00000169559.3 Vmn2r110-201

Summary

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