Mouse (GRCm39)
Description

VPS50 EARP/GARPII complex subunit [Source:MGI Symbol;Acc:MGI:1920538]

Gene Synonyms

1700034M03Rik, 8430415E05Rik, Ccdc132

Location
About this transcript

This transcript has 28 exons, is annotated with 11 domains and features, is associated with 4282 variant alleles and maps to 296 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000001412.17Vps50-2013788964aaENSMUSP00000001412.9
 
Protein coding
CCDS39415Q8CI71 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000164052.5Vps50-2024824929aaENSMUSP00000125872.2
 
Protein coding
CCDS51713Q8CI71-2 GENCODE basicTSL:1
ENSMUST00000170873.10Vps50-2033687938aaENSMUSP00000128323.2
 
Protein coding
CCDS51714Q8CI71-3 GENCODE basicTSL:1
ENSMUST00000183532.8Vps50-2041786No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000183935.2Vps50-205493No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000184411.2Vps50-206391No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000184461.8Vps50-2075361No protein-
 
Retained intron
-TSL:1
ENSMUST00000184780.8Vps50-2081587No protein-
 
Retained intron
-TSL:1
ENSMUST00000184959.2Vps50-209667No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 28, Coding exons: 28, Transcript length: 4,824 bps, Translation length: 929 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CI71

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51713

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000164052.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.