Mouse (GRCm39)
Description

nuclear transcription factor-Y alpha [Source:MGI Symbol;Acc:MGI:97316]

Gene Synonyms

Cbf-b, Sez10

Location
About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 1625 variant alleles and maps to 251 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000046719.14Nfya-2013645347aaENSMUSP00000043909.8
 
Protein coding
CCDS50142Q9DBV7 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000162460.8Nfya-2123706318aaENSMUSP00000123785.2
 
Protein coding
CCDS28867P23708-2 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000078800.13Nfya-2023653346aaENSMUSP00000077853.7
 
Protein coding
CCDS84321P23708 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000160319.8Nfya-2061407341aaENSMUSP00000124245.2
 
Protein coding
E0CYF3 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000159063.8Nfya-2031255312aaENSMUSP00000124404.2
 
Protein coding
CCDS84320A0A0R4J1Y8 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000159535.2Nfya-205880232aaENSMUSP00000124501.2
 
Protein coding
E0CY40 TSL:3CDS 3' incomplete
ENSMUST00000159237.8Nfya-204805208aaENSMUSP00000124115.2
 
Protein coding
F6TWX0 TSL:3CDS 5' incomplete
ENSMUST00000161256.8Nfya-209701211aaENSMUSP00000125034.2
 
Protein coding
F7DFJ2 TSL:3CDS 5' incomplete
ENSMUST00000161117.8Nfya-208643214aaENSMUSP00000124965.2
 
Protein coding
F6TUY8 TSL:3CDS 5' and 3' incomplete
ENSMUST00000161686.2Nfya-2112779No protein-
 
Retained intron
-TSL:1
ENSMUST00000161603.2Nfya-210741No protein-
 
Retained intron
-TSL:5
ENSMUST00000160804.2Nfya-207640No protein-
 
Retained intron
-TSL:2
ENSMUST00000163066.2Nfya-213605No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,706 bps, Translation length: 318 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23708

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28867

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000162460.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.