Transcript: ENSMUST00000159241.2 Gstt4-201

Description

glutathione S-transferase, theta 4 [Source:MGI Symbol;Acc:MGI:1923136]

Gene Synonyms

4930583C14Rik

Location

Chromosome 10: 75,650,778-75,658,361 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 843 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000009093.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000160211.2	Gstt4-202	964	240aa	ENSMUSP00000125604.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23933	Q9D4P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000159241.2	Gstt4-201	940	49aa	ENSMUSP00000124989.2	Nonsense mediated decay		E9PVU4	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 940 bps, Translation length: 49 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000159241.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000159241.2 Gstt4-201

Summary

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Transcript: ENSMUST00000159241.2 Gstt4-201

Summary

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