Mouse (GRCm39)
Description

collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]

Gene Synonyms

2700007F12Rik, A530052M23Rik, [a]1 (XVI) collagen

About this transcript

This transcript has 2 exons, is associated with 687 variant alleles and maps to 38 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000044565.15Col16a1-20152061580aaENSMUSP00000035802.9
 
Protein coding
CCDS38889Q8BLX7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000143577.2Col16a1-21040371283aaENSMUSP00000120339.2
 
Protein coding
A3KFV7 TSL:1CDS 5' incomplete
ENSMUST00000123617.8Col16a1-204452129aaENSMUSP00000121415.2
 
Protein coding
A3KFV6 TSL:5CDS 3' incomplete
ENSMUST00000132251.2Col16a1-20641022aaENSMUSP00000121209.2
 
Protein coding
A3KFV1 TSL:3CDS 3' incomplete
ENSMUST00000142293.8Col16a1-20838361aaENSMUSP00000119219.2
 
Protein coding
A3KFV2 TSL:2CDS 3' incomplete
ENSMUST00000143432.8Col16a1-20951381046aaENSMUSP00000120384.2
 
Nonsense mediated decay
E9Q0X4 TSL:1
ENSMUST00000097867.9Col16a1-2024574No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000106001.8Col16a1-2033519No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000135675.2Col16a1-207833No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000146606.8Col16a1-211717No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000129937.2Col16a1-205445No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000151541.8Col16a1-212322No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000154441.2Col16a1-213477No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 2, Coding exons: 0, Transcript length: 477 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000154441.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.