Transcript: ENSMUST00000152758.4 Or5aq1-202

Description

olfactory receptor family 5 subfamily AQ member 1 [Source:MGI Symbol;Acc:MGI:3030944]

Gene Synonyms

GA_x6K02T2Q125-48621299-48620361, MOR172-4, Olfr1110

Location

Chromosome 2: 86,964,017-86,970,644 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features, is associated with 1080 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000075159.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000152758.4	Or5aq1-202	3159	312aa	ENSMUSP00000149495.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16282	Q8VG38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000099861.2	Or5aq1-201	939	312aa	ENSMUSP00000097447.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16282	Q8VG38	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,159 bps, Translation length: 312 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16282

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000152758.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000152758.4 Or5aq1-202

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Transcript: ENSMUST00000152758.4 Or5aq1-202

Summary

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