Transcript: ENSMUST00000148897.8 Glipr1l2-202

Description

GLI pathogenesis-related 1 like 2 [Source:MGI Symbol;Acc:MGI:1914787]

Gene Synonyms

4921508O11Rik

Location

Chromosome 10: 111,919,259-111,943,216 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 2096 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000020214.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000020434.4	Glipr1l2-201	1879	332aa	ENSMUSP00000020434.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24171	Q9CQ35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000148897.8	Glipr1l2-202	1117	226aa	ENSMUSP00000122771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS83755	Q9CQ35-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,117 bps, Translation length: 226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CQ35

CCDS

This transcript is a member of the Mouse CCDS set: CCDS83755

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000148897.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000148897.8 Glipr1l2-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000148897.8 Glipr1l2-202

Summary

About Us

Get help

Our sister sites

Follow us