Transcript: ENSMUST00000147153.4 Lipo2-201

Description

lipase, member O2 [Source:MGI Symbol;Acc:MGI:3644466]

Gene Synonyms

Gm8981

Location

Chromosome 19: 33,697,199-33,728,759 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 1552 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087303.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000147153.4	Lipo2-201	2184	398aa	ENSMUSP00000118907.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS84434	D3YY49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000236408.2	Lipo2-203	1778	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000238164.2	Lipo2-204	1550	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235430.2	Lipo2-202	923	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,184 bps, Translation length: 398 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS84434

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000147153.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000147153.4 Lipo2-201

Summary

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Transcript: ENSMUST00000147153.4 Lipo2-201

Summary

About Us

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