Transcript: ENSMUST00000146856.4 Tpsab1-201

Description

tryptase alpha/beta 1 [Source:MGI Symbol;Acc:MGI:96943]

Gene Synonyms

MMCP-7, Mcp-7, Mcpt7

Location

Chromosome 17: 25,562,219-25,564,536 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 782 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024173.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000153118.3	Tpsab1-202	1199	310aa	ENSMUSP00000120741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PY32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000249720.1	Tpsab1-204	1926	83aa	ENSMUSP00000159890.1	Nonsense mediated decay	-	-
ENSMUST00000249721.1	Tpsab1-205	1231	113aa	ENSMUSP00000159891.1	Nonsense mediated decay	-	-
ENSMUST00000249719.1	Tpsab1-203	1100	83aa	ENSMUSP00000159889.1	Nonsense mediated decay	-	-
ENSMUST00000146856.4	Tpsab1-201	1928	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,928 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000146856.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000146856.4 Tpsab1-201

Summary

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Transcript: ENSMUST00000146856.4 Tpsab1-201

Summary

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