Transcript: ENSMUST00000130076.2 Galp-202

Description

galanin-like peptide [Source:MGI Symbol;Acc:MGI:2663979]

Location

Chromosome 7: 6,205,800-6,214,365 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1191 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000034660.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000037553.6	Galp-201	650	117aa	ENSMUSP00000037408.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20771	Q810H5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000130076.2	Galp-202	147	49aa	ENSMUSP00000146615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LHZ7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 147 bps, Translation length: 49 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSMUST00000130076.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000130076.2 Galp-202

Summary

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Transcript: ENSMUST00000130076.2 Galp-202

Summary

About Us

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