Transcript: ENSMUST00000128557.3 Champ1-202

Description

chromosome alignment maintaining phosphoprotein 1 [Source:MGI Symbol;Acc:MGI:1196398]

Gene Synonyms

D8Ertd457e, D8Ertd569e, Zfp828

Location

Chromosome 8: 13,919,704-13,931,639 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 30 domains and features, is associated with 795 variant alleles and maps to 281 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000047710.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000051870.8	Champ1-201	4013	802aa	ENSMUSP00000057270.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22116	Q8K327	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000128557.3	Champ1-202	3977	802aa	ENSMUSP00000120117.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22116	Q8K327	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,977 bps, Translation length: 802 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K327

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22116

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000128557.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000128557.3 Champ1-202

Summary

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Transcript: ENSMUST00000128557.3 Champ1-202

Summary

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