Mouse (GRCm39)
Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:MGI Symbol;Acc:MGI:1203727]

Gene Synonyms

A730020P05Rik, Sema6A-1, Semaq, VIa, sema

Location
About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 2725 variant alleles and maps to 36 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000135790.8Sema6a-20543391048aaENSMUSP00000120011.2
 
Protein coding
D3YWM8 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000019791.14Sema6a-20168561031aaENSMUSP00000019791.8
 
Protein coding
CCDS37813O35464 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000076043.13Sema6a-2024123976aaENSMUSP00000075420.7
 
Protein coding
CCDS79642O35464-3 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000156422.8Sema6a-20932911031aaENSMUSP00000121442.2
 
Protein coding
CCDS37813O35464 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000126684.2Sema6a-204740216aaENSMUSP00000118655.2
 
Protein coding
D3YZJ8 TSL:3CDS 3' incomplete
ENSMUST00000123228.8Sema6a-203652111aaENSMUSP00000120249.2
 
Protein coding
F6WLW8 TSL:5CDS 5' incomplete
ENSMUST00000151382.8Sema6a-2083328No protein-
 
Retained intron
-TSL:1
ENSMUST00000141224.8Sema6a-2063225No protein-
 
Retained intron
-TSL:1
ENSMUST00000144223.2Sema6a-207717No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 652 bps, Translation length: 111 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000123228.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.