Mouse (GRCm39)
Description

autophagy related 4A, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2147903]

Gene Synonyms

Apg4a, Autl2, autophagin 2

About this transcript

This transcript has 13 exons, is annotated with 6 domains and features, is associated with 4903 variant alleles and maps to 218 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112971.2Atg4a-2012202396aaENSMUSP00000108595.2
 
Protein coding
CCDS85810Q5EBK1 Q8C9S8 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000239541.1Atg4a-2042091372aaENSMUSP00000159430.2
 
Protein coding
A0A7N9VS64 GENCODE basic
ENSMUST00000239544.1Atg4a-2071857213aaENSMUSP00000159432.2
 
Nonsense mediated decay
A0A7N9VT17 -
ENSMUST00000153742.3Atg4a-20375288aaENSMUSP00000159431.2
 
Nonsense mediated decay
A0A7P0A158 TSL:5
ENSMUST00000239542.1Atg4a-205799No protein-
 
Protein coding CDS not defined
--
ENSMUST00000239543.1Atg4a-206429No protein-
 
Protein coding CDS not defined
--
ENSMUST00000147972.2Atg4a-202696No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,202 bps, Translation length: 396 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C9S8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS85810

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000112971.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.