Transcript: ENSMUST00000108121.4 Bbs12-202

Description

Bardet-Biedl syndrome 12 (human) [Source:MGI Symbol;Acc:MGI:2686651]

Gene Synonyms

LOC241950, LOC386537

Location

Chromosome 3: 37,366,705-37,375,602 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 893 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000051444.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000057975.8	Bbs12-201	2433	708aa	ENSMUSP00000052179.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38417	Q5SUD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000108121.4	Bbs12-202	2348	593aa	ENSMUSP00000103756.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57209	Z4YKQ3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,348 bps, Translation length: 593 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57209

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000108121.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000108121.4 Bbs12-202

Summary

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Transcript: ENSMUST00000108121.4 Bbs12-202

Summary

About Us

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