Transcript: ENSMUST00000107855.2 Glipr2-202

Description

GLI pathogenesis-related 2 [Source:MGI Symbol;Acc:MGI:1917770]

Gene Synonyms

5730414A08Rik, GAPR-1

Location

Chromosome 4: 43,957,692-43,979,118 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 1904 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000028480.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000030202.14	Glipr2-201	2320	154aa	ENSMUSP00000030202.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18117	Q9CYL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000107855.2	Glipr2-202	1816	83aa	ENSMUSP00000103487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AWD6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,816 bps, Translation length: 83 residues

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000107855.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000107855.2 Glipr2-202

Summary

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Transcript: ENSMUST00000107855.2 Glipr2-202

Summary

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