Mouse (GRCm39)
Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]

Gene Synonyms

1110067B02Rik, Sema6D-1, Sema6D-2, Sema6D-4, Sema6D-5, Sema6D-6

About this transcript

This transcript has 19 exons, is annotated with 25 domains and features, is associated with 2762 variant alleles and maps to 357 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000103239.10Sema6d-20662251073aaENSMUSP00000099529.4
 
Protein coding
CCDS16673Q76KF0 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:5
ENSMUST00000077847.12Sema6d-20364441054aaENSMUSP00000077014.6
 
Protein coding
CCDS16672Q76KF0-6 GENCODE basicTSL:5
ENSMUST00000078621.12Sema6d-20463721030aaENSMUSP00000077691.6
 
Protein coding
CCDS38225Q76KF0-5 GENCODE basicTSL:5
ENSMUST00000076335.12Sema6d-2026276998aaENSMUSP00000075674.6
 
Protein coding
CCDS16671Q76KF0-3 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000103241.8Sema6d-2086157998aaENSMUSP00000099531.2
 
Protein coding
CCDS16671Q76KF0-3 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000051419.15Sema6d-20145031011aaENSMUSP00000061123.9
 
Protein coding
CCDS16670Q76KF0-2 GENCODE basicTSL:1
ENSMUST00000103240.9Sema6d-20743721069aaENSMUSP00000099530.3
 
Protein coding
CCDS71132A2AW73 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000103238.2Sema6d-20531651054aaENSMUSP00000099528.2
 
Protein coding
CCDS16672Q76KF0-6 GENCODE basicTSL:1
ENSMUST00000151199.2Sema6d-211746No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000132088.2Sema6d-2094475No protein-
 
Retained intron
-TSL:2
ENSMUST00000137172.2Sema6d-210713No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 19, Coding exons: 18, Transcript length: 6,225 bps, Translation length: 1,073 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q76KF0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16673

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000103239.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.