Transcript: ENSMUST00000100638.4 Tmem253-201

Description

transmembrane protein 253 [Source:MGI Symbol;Acc:MGI:3588246]

Gene Synonyms

G630016D24Rik

Location

Chromosome 14: 52,254,322-52,257,251 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 527 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000072571.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000100638.4	Tmem253-201	1234	204aa	ENSMUSP00000098203.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27049	Q3UNB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227295.2	Tmem253-203	704	170aa	ENSMUSP00000154460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BR52	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000228408.2	Tmem253-204	415	47aa	ENSMUSP00000153729.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BPD3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000226268.2	Tmem253-202	347	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,234 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UNB8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27049

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000100638.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000100638.4 Tmem253-201

Summary

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Transcript: ENSMUST00000100638.4 Tmem253-201

Summary

About Us

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