Transcript: ENSMUST00000099899.3 Or8k18-201

Description

olfactory receptor family 8 subfamily K member 18 [Source:MGI Symbol;Acc:MGI:3030883]

Gene Synonyms

GA_x6K02T2Q125-47735396-47734470, MOR187-1, Olfr1049

Location

Chromosome 2: 86,085,109-86,086,061 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 26 domains and features, is associated with 823 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000075194.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000216185.3	Or8k18-202	1471	308aa	ENSMUSP00000149360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16248	A2ARZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000099899.3	Or8k18-201	953	308aa	ENSMUSP00000097483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16248	A2ARZ0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 953 bps, Translation length: 308 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16248

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000099899.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000099899.3 Or8k18-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000099899.3 Or8k18-201

Summary

About Us

Get help

Our sister sites

Follow us