Mouse (GRCm39)
Description

ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]

Gene Synonyms

2010012G17Rik, 4933421E11Rik

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 913 variant alleles and maps to 199 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000098750.5Lrif1-2013103755aaENSMUSP00000096346.3
 
Protein coding
CCDS17726Q8CDD9 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000106736.3Lrif1-2031669237aaENSMUSP00000102347.3
 
Protein coding
CCDS17727G5E8M8 GENCODE basicTSL:1
ENSMUST00000098751.10Lrif1-202929257aaENSMUSP00000096347.4
 
Protein coding
CCDS38586G3X9P5 GENCODE basicTSL:2
ENSMUST00000130105.2Lrif1-207674178aaENSMUSP00000115110.2
 
Protein coding
D3YWW6 TSL:2CDS 3' incomplete
ENSMUST00000150513.2Lrif1-209646129aaENSMUSP00000119815.2
 
Protein coding
D3Z1H3 TSL:3CDS 3' incomplete
ENSMUST00000154973.2Lrif1-211578124aaENSMUSP00000120350.2
 
Protein coding
D3Z005 TSL:3CDS 3' incomplete
ENSMUST00000127003.8Lrif1-2061989539aaENSMUSP00000114163.2
 
Nonsense mediated decay
Q8CDD9-2 TSL:1
ENSMUST00000106737.4Lrif1-2041411No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000156544.2Lrif1-212672No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000131330.3Lrif1-2084737No protein-
 
Retained intron
-TSL:NA
ENSMUST00000122928.2Lrif1-2053138No protein-
 
Retained intron
-TSL:1
ENSMUST00000150888.2Lrif1-210720No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,103 bps, Translation length: 755 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CDD9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17726

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000098750.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.