Mouse (GRCm39)
Description

VPS53 GARP complex subunit [Source:MGI Symbol;Acc:MGI:1915549]

Gene Synonyms

2010002A08Rik, 2310040I21Rik, 3100002B05Rik

Location
About this transcript

This transcript has 21 exons, is annotated with 12 domains and features, is associated with 6539 variant alleles and maps to 327 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000056601.11Vps53-2012833832aaENSMUSP00000061317.5
 
Protein coding
CCDS25060Q8CCB4 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000094015.11Vps53-2022645803aaENSMUSP00000091554.5
 
Protein coding
E9PXG9 GENCODE basicTSL:5
ENSMUST00000108419.9Vps53-2032209655aaENSMUSP00000104057.3
 
Protein coding
Q8CCB4-2 GENCODE basicTSL:1
ENSMUST00000167114.8Vps53-2131259419aaENSMUSP00000131663.2
 
Protein coding
E9PWD1 TSL:5CDS 3' incomplete
ENSMUST00000129256.2Vps53-20465036aaENSMUSP00000126125.2
 
Protein coding
E9Q124 GENCODE basicTSL:1
ENSMUST00000166436.8Vps53-211610204aaENSMUSP00000131387.2
 
Protein coding
F6Z4G7 TSL:5CDS 5' and 3' incomplete
ENSMUST00000170730.3Vps53-216506123aaENSMUSP00000127364.2
 
Protein coding
E9Q3C3 TSL:5CDS 3' incomplete
ENSMUST00000169734.8Vps53-2142097334aaENSMUSP00000130499.2
 
Nonsense mediated decay
E9Q648 TSL:5
ENSMUST00000166752.8Vps53-2121888547aaENSMUSP00000129159.2
 
Nonsense mediated decay
E9PYD3 TSL:5
ENSMUST00000163878.2Vps53-20960641aaENSMUSP00000128856.2
 
Nonsense mediated decay
E9Q8C4 TSL:5
ENSMUST00000166084.8Vps53-210726No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000141773.8Vps53-206486No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000140886.3Vps53-205478No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000143459.2Vps53-208361No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000143163.8Vps53-2072175No protein-
 
Retained intron
-TSL:1
ENSMUST00000170143.8Vps53-215846No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,645 bps, Translation length: 803 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000094015.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.