Mouse (GRCm39)
Description

whirlin [Source:MGI Symbol;Acc:MGI:2682003]

Gene Synonyms

1110035G07Rik, C430046P22Rik, Dfnb31, Ush2d, wi

Location
About this transcript

This transcript has 13 exons, is annotated with 58 domains and features, is associated with 4837 variant alleles and maps to 280 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000084510.8Whrn-2034049918aaENSMUSP00000081557.2
 
Protein coding
CCDS18255Q80VW5 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000107393.8Whrn-2074028911aaENSMUSP00000103016.2
 
Protein coding
CCDS38778Q80VW5-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000063650.10Whrn-2014016907aaENSMUSP00000069664.4
 
Protein coding
CCDS18257Q80VW5-3 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000102867.8Whrn-2064013906aaENSMUSP00000099931.2
 
Protein coding
CCDS18256Q80VW5-4 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000063672.10Whrn-2022804571aaENSMUSP00000065838.4
 
Protein coding
Q80VW5-10 GENCODE basicTSL:1
ENSMUST00000095038.8Whrn-2052665476aaENSMUSP00000092648.2
 
Protein coding
Q80VW5-6 GENCODE basicTSL:1
ENSMUST00000119294.8Whrn-2082632465aaENSMUSP00000114030.2
 
Protein coding
Q80VW5-7 GENCODE basicTSL:1
ENSMUST00000095037.2Whrn-2042419404aaENSMUSP00000092647.2
 
Protein coding
Q80VW5-8 GENCODE basicTSL:1
ENSMUST00000133425.2Whrn-210797164aaENSMUSP00000119280.2
 
Protein coding
I7HNW6 TSL:1CDS 5' incomplete
ENSMUST00000144965.8Whrn-21259074aaENSMUSP00000121944.2
 
Protein coding
F6RBK9 TSL:3CDS 5' incomplete
ENSMUST00000145630.8Whrn-21432328aaENSMUSP00000116387.2
 
Nonsense mediated decay
F7BB17 TSL:1CDS 5' incomplete
ENSMUST00000124016.8Whrn-2092741No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000148957.2Whrn-215510No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000145133.8Whrn-2132869No protein-
 
Retained intron
-TSL:1
ENSMUST00000155058.8Whrn-2172537No protein-
 
Retained intron
-TSL:1
ENSMUST00000140720.2Whrn-211872No protein-
 
Retained intron
-TSL:3
ENSMUST00000153307.2Whrn-216783No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,049 bps, Translation length: 918 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80VW5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18255

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000084510.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.