Transcript: ENSMUST00000079716.6 Rpl17-201

Description

ribosomal protein L17 [Source:MGI Symbol;Acc:MGI:2448270]

Location

Chromosome 18: 75,133,548-75,136,452 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 975 variant alleles and maps to 948 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000062328.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000237431.2	Rpl17-202	1326	184aa	ENSMUSP00000157556.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29344	Q9CPR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000079716.6	Rpl17-201	775	184aa	ENSMUSP00000078654.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29344	Q9CPR4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 775 bps, Translation length: 184 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CPR4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29344

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000079716.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000079716.6 Rpl17-201

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Transcript: ENSMUST00000079716.6 Rpl17-201

Summary

About Us

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