Transcript: ENSMUST00000076505.4 Pyroxd2-201

Description

pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:MGI Symbol;Acc:MGI:1921830]

Gene Synonyms

3830409H07Rik, 4833409A17Rik

Location

Chromosome 19: 42,714,297-42,741,214 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 7 domains and features, is associated with 2427 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000060224.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000236659.2	Pyroxd2-203	3137	587aa	ENSMUSP00000157893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000076505.4	Pyroxd2-201	3119	581aa	ENSMUSP00000075825.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37991	Q3U4I7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237747.2	Pyroxd2-204	1903	164aa	ENSMUSP00000158428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB94	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000235183.2	Pyroxd2-202	2093	52aa	ENSMUSP00000157694.2	Nonsense mediated decay		A0A494B9P0	-
ENSMUST00000238158.2	Pyroxd2-205	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,119 bps, Translation length: 581 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3U4I7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37991

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000076505.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000076505.4 Pyroxd2-201

Summary

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Transcript: ENSMUST00000076505.4 Pyroxd2-201

Summary

About Us

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