Mouse (GRCm39)
Description

syntaxin 5A [Source:MGI Symbol;Acc:MGI:1928483]

Gene Synonyms

0610031F24Rik, D19Ertd627e, syntaxin 5

Location
About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 1118 variant alleles and maps to 266 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000010254.16Stx5a-2011780442aaENSMUSP00000010254.10
 
Protein coding
I1E4X1 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000176381.8Stx5a-2132251355aaENSMUSP00000134854.2
 
Protein coding
CCDS29542Q8K1E0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000073430.14Stx5a-2022112355aaENSMUSP00000073136.8
 
Protein coding
CCDS29542Q8K1E0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000175901.8Stx5a-2061153262aaENSMUSP00000134951.2
 
Protein coding
H3BJE3 TSL:5CDS 3' incomplete
ENSMUST00000176968.2Stx5a-2171049109aaENSMUSP00000135468.2
 
Protein coding
H3BKP3 TSL:2CDS 3' incomplete
ENSMUST00000177373.8Stx5a-219995259aaENSMUSP00000134794.2
 
Protein coding
H3BJ02 GENCODE basicTSL:5
ENSMUST00000176570.2Stx5a-21556357aaENSMUSP00000134892.2
 
Protein coding
H3BJ89 GENCODE basicTSL:2
ENSMUST00000176314.8Stx5a-21237877aaENSMUSP00000135348.2
 
Protein coding
H3BKD6 TSL:3CDS 3' incomplete
ENSMUST00000176013.8Stx5a-2082106144aaENSMUSP00000135465.2
 
Nonsense mediated decay
H3BKP0 TSL:5
ENSMUST00000175872.8Stx5a-2051720234aaENSMUSP00000135416.2
 
Nonsense mediated decay
H3BKJ7 TSL:5
ENSMUST00000177322.8Stx5a-2181697101aaENSMUSP00000135624.2
 
Nonsense mediated decay
H3BL25 TSL:5
ENSMUST00000176093.2Stx5a-2093015No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176260.8Stx5a-2111025No protein-
 
Retained intron
-TSL:5
ENSMUST00000175834.2Stx5a-204789No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176009.2Stx5a-207774No protein-
 
Retained intron
-TSL:3
ENSMUST00000176182.8Stx5a-210670No protein-
 
Retained intron
-TSL:2
ENSMUST00000176404.2Stx5a-214584No protein-
 
Retained intron
-TSL:3
ENSMUST00000175642.2Stx5a-203523No protein-
 
Retained intron
-TSL:2
ENSMUST00000176844.2Stx5a-216419No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,112 bps, Translation length: 355 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K1E0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29542

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000073430.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.