Transcript: ENSMUST00000060700.4 Ankrd34c-201

Description

ankyrin repeat domain 34C [Source:MGI Symbol;Acc:MGI:2685617]

Gene Synonyms

B230218L05Rik, LOC330998

Location

Chromosome 9: 89,607,298-89,620,498 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 1082 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000047606.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000060700.4	Ankrd34c-201	5457	534aa	ENSMUSP00000056787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23397	B2RPW9 Q8BLB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000185470.3	Ankrd34c-202	2475	534aa	ENSMUSP00000140919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23397	B2RPW9 Q8BLB8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,457 bps, Translation length: 534 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BLB8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23397

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000060700.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

3' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000060700.4 Ankrd34c-201

Summary

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Transcript: ENSMUST00000060700.4 Ankrd34c-201

Summary

About Us

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