Mouse (GRCm39)
Description

SNF2 histone linker PHD RING helicase [Source:MGI Symbol;Acc:MGI:1917581]

Gene Synonyms

2610103K11Rik, D230017O13Rik

Location
About this transcript

This transcript has 30 exons, is annotated with 38 domains and features, is associated with 3265 variant alleles and maps to 422 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000044053.13Shprh-20192711674aaENSMUSP00000039422.7
 
Protein coding
CCDS35838Q7TPQ3 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000054814.14Shprh-20272251616aaENSMUSP00000125849.2
 
Protein coding
CCDS35839Q7TPQ3-2 GENCODE basicTSL:1
ENSMUST00000159541.8Shprh-20366791646aaENSMUSP00000132870.2
 
Protein coding
CCDS70003Q7TPQ3-5 GENCODE basicTSL:1
ENSMUST00000159810.8Shprh-20541711031aaENSMUSP00000125457.2
 
Nonsense mediated decay
Q7TPQ3-3 TSL:1
ENSMUST00000160461.8Shprh-206945218aaENSMUSP00000125127.2
 
Nonsense mediated decay
F7D4T4 TSL:3CDS 5' incomplete
ENSMUST00000159553.8Shprh-2043467No protein-
 
Retained intron
-TSL:1
ENSMUST00000161858.2Shprh-2073028No protein-
 
Retained intron
-TSL:1
ENSMUST00000161910.2Shprh-2082857No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 30, Coding exons: 29, Transcript length: 9,271 bps, Translation length: 1,674 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TPQ3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35838

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000044053.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.