Transcript: ENSMUST00000043797.6 Capza3-201

Description

capping actin protein of muscle Z-line subunit alpha 3 [Source:MGI Symbol;Acc:MGI:106221]

Gene Synonyms

510-4, Cappa3, Gsg3, Tex8, cp alpha3, repro32

Location

Chromosome 6: 139,987,283-139,988,504 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 10 domains and features, is associated with 773 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000041791.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000043797.6	Capza3-201	1222	299aa	ENSMUSP00000038562.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20672	P70190	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000204342.2	Capza3-202	771	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,222 bps, Translation length: 299 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P70190

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20672

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000043797.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000043797.6 Capza3-201

Summary

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Transcript: ENSMUST00000043797.6 Capza3-201

Summary

About Us

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