Transcript: ENSMUST00000031122.9 Gabrb1-201

Description

gamma-aminobutyric acid (GABA) A receptor, subunit beta 1 [Source:MGI Symbol;Acc:MGI:95619]

Gene Synonyms

B230208N19Rik, Gabrb-1

Location

Chromosome 5: 71,857,275-72,306,380 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 19374 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000029212.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000031122.9	Gabrb1-201	13737	474aa	ENSMUSP00000031122.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19329	P50571 Q53WT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000199967.5	Gabrb1-202	799	226aa	ENSMUSP00000143682.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JGS8	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 13,737 bps, Translation length: 474 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50571

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19329

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000031122.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000031122.9 Gabrb1-201

Summary

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Transcript: ENSMUST00000031122.9 Gabrb1-201

Summary

About Us

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