Mouse (GRCm39)
Description

RIKEN cDNA 5730480H06 gene [Source:MGI Symbol;Acc:MGI:1917842]

Location
About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 1419 variant alleles and maps to 243 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000196950.55730480H06Rik-2053300248aaENSMUSP00000143072.2
 
Protein coding
CCDS19281Q9D3X5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000030968.75730480H06Rik-2011616248aaENSMUSP00000030968.3
 
Protein coding
CCDS19281Q9D3X5 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000200566.55730480H06Rik-209142293aaENSMUSP00000142613.2
 
Nonsense mediated decay
A0A0G2JE33 TSL:5
ENSMUST00000195960.55730480H06Rik-20354959aaENSMUSP00000142685.2
 
Nonsense mediated decay
A0A0G2JE98 TSL:2CDS 5' incomplete
ENSMUST00000196604.25730480H06Rik-204705No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000199818.25730480H06Rik-208587No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000197072.25730480H06Rik-2065405No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176521.65730480H06Rik-2021702No protein-
 
Retained intron
-TSL:1
ENSMUST00000197915.25730480H06Rik-207648No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,616 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D3X5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19281

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000030968.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.