Mouse (GRCm39)
Description

sorting nexin family member 27 [Source:MGI Symbol;Acc:MGI:1923992]

Gene Synonyms

5730552M22Rik, ESTM47

Location
About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 4027 variant alleles and maps to 301 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000107283.8Snx27-2023531539aaENSMUSP00000102904.2
 
Protein coding
CCDS38537Q3UHD6 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000029783.16Snx27-2016261526aaENSMUSP00000029783.10
 
Protein coding
CCDS38538Q3UHD6-2 GENCODE basicTSL:1
ENSMUST00000200642.5Snx27-2081308435aaENSMUSP00000143066.2
 
Protein coding
A0A0G2JF85 GENCODE basicTSL:5
ENSMUST00000199462.5Snx27-207251063aaENSMUSP00000143378.2
 
Nonsense mediated decay
A0A0G2JG07 TSL:5
ENSMUST00000198426.2Snx27-205599110aaENSMUSP00000143525.2
 
Nonsense mediated decay
A0A0G2JGD5 TSL:3CDS 5' incomplete
ENSMUST00000196675.5Snx27-204734No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000198902.2Snx27-206649No protein-
 
Protein coding CDS not defined
-TSL:NA
ENSMUST00000196251.2Snx27-203599No protein-
 
Protein coding CDS not defined
-TSL:5
Statistics

Exons: 12, Coding exons: 12, Transcript length: 6,261 bps, Translation length: 526 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UHD6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38538

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000029783.16

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.